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SRX2922490: RNA-Seq of Polianthes tuberosa TN9: watered, 17 ZT
1 ILLUMINA (NextSeq 500) run: 50.4M spots, 7.6G bases, 2.8Gb downloads

Design: Kapa mRNA seq kit
Submitted by: University of Georgia
Study: Agavoideae Transcriptomes
show Abstracthide Abstract
To elucidate the genomic mechanisms behind the evolution of Crassulacean acid metabolism (CAM), we conducted mRNA sequencing from four genera in the Agavoideae - Agave, Manfreda, Polianthes, and Beschorneria - that vary in their photosynthetic pathway. Tissue was sampled every four hours over a 24-hour period in a growth chamber, under both well-watered and drought-stressed conditions. Resulting transcriptomes were compared in their gene expression profiles to discover shared and novel expression patterns between C3 and CAM lineages.
Sample: Polianthes tuberosa (watered) T5
SAMN07236771 • SRS2288250 • All experiments • All runs
Organism: Agave amica
Library:
Name: P44
Instrument: NextSeq 500
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 50.4M spots, 7.6G bases, 2.8Gb
Run# of Spots# of BasesSizePublished
SRR568764450,427,5207.6G2.8Gb2017-12-01

ID:
4176252

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